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stsadm enumsites reveals duplicate sites

Here is my scenario, I am in the process of cleaning up our content databases 
for an upcoming upgrade to MOSS 2007 and after running the prescan there were 
5 sites that didn't get upgraded.  The prescan log shows a link to a KB for 
orphaned objects but for those five sites there are entries in both the 
config and content databases.  

I also ran "stsadm -o databaserepair" and it also confirmed that there were no orphaned objects in the databases.  Now when ever I try to navigate to one of those 5 sites I get a 404 error, yet everything in the database looks normal.

I finally ran "stsadm -o enumsites" to check if those 5 sites show up there and they didn't but there were 5 sites with the same url.  I'm not sure if they are those sites but I have a hunch they are. Anyone have any ideas what this is and how I can go about fixing it?
Someone please help!!!!!
 
Thanks in advance, 
Danny H

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